![]() ![]() The interaction between two chemical compounds (typically a protein, enzyme or receptor, and a small molecule, or ligand) is calculated by using highly computationally demanding scoring functions that are computed at several binding spots located throughout the protein surface. Virtual screening through molecular docking can be translated into an optimization problem, which can be tackled with metaheuristic methods. The efficient exploitation of these systems enables HYPERDOCK to improve ligand–receptor binding. The different levels of parallelism can be used to exploit the parallelism offered by computational systems composed of multicore CPU + multi-GPUs. HYPERDOCK exploits the parallelism of METADOCK and includes parallelism at its own level. Multiple metaheuristics are explored, so the process is computationally demanding. HYPERDOCK represents a step forward the exploration for satisfactory metaheuristics is systematically approached by means of hyperheuristics working on top of the metaheuristic schema of METADOCK. ![]() METADOCK is a tool for the application of metaheuristics to VS in heterogeneous clusters of computers based on central processing unit (CPU) and graphics processing unit (GPU). The computational requirements of VS, along with the size of the databases, propitiate the use of high-performance computing. Other than the preview, it shows which desktop the window is at, and it has some cool features like Spotify/iTunes controls and iCal calendar event list.Virtual screening (VS) methods aid clinical research by predicting the interaction of ligands with pharmacological targets. Yes, like Windows’, and it’s super helpful. It brings window previews to the dock when hovering on an icon. Writing your own workflow is easy using the integrated editor and a programming language. I also wrote a few that open all terminal (iTerm) windows that start all commands of a project (api server, test, client side server, db console etc). I use several workflows daily: Evernote(search/create), Translate, Copy Paths to Clipboard, My IP, and more. On its own, it’s a simple alternative for Spotlight, but with the Power Pack it gets workflow/plugin support. Naturally, it still lacks integration with 3rd party products and powerful developer tools.Īlfred is a well known alternative that has been around for a few years. Over the years, Apple has improved Spotlight a lot. In addition to this awesome personal search engine that you curate for yourself, Kifi has an on-page chat for collaboration/quick sharing for you and your team/friends (we use it at work) and the ability to find links kept by people you follow. No need to tag the page or anything, it’s full-text search. Just search something like react server side render and it’ll appear first (most likely) on Google (the extension makes it happen). In a month, you totally forgot about it or how you got to it. You don’t need it right now, but maybe in the future, so you keep the page. So let’s say you encounter this tutorial, “ Sever-Side Rendering with Redux and React-Router”. It indexes the content of a kept page, and makes it easy to find later. In its core, Kifi is a Chrome Extension that lets you keep web pages with a click. Kifi revolves around bookmarking, search, and collaboration. A list of really awesome tools I use every day to increase my productivity.
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